ASG - Alternative Splicing Gallery
About ASG
FAQ
Search Human Splicing Graphs
+ BLAST a single FASTA-formatted sequence
Significance threshold:
10e-
Database:
Representative assemblies
Genomic sequences
Blast type:
blastn
tblastn
Use the following case-sensitive syntax in your search for an exact match:
Ensembl:
ENSG00000105419
UniGene:
Hs.104696
TIGR:
THC1653104
RefSeq:
NM_002502.2
STACK:
cl523ct1332cn3969
Contains
Matches
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Display options:
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domains
,
ESTs
and
assemblies
Display exons to actual proportions
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assemblies
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+ 1 matching ENSG entries. First entry is displayed.
> marks the current cluster
Related to
Name
Ext. link
cl523ct1332cn3969
>
ENSG00000001461
Ensembl
Splicing graph of Ensembl gene ENSG00000001461
Sequence builder:
Shaded boxes correspond to exons or exon fragments, unshaded ones to introns or up- and downstream sequences.
Click on the boxes below or in the splicing graph to select them for output. Click again to deselect.
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Output to:
Screen
File
Simple alternative splicing events:
Intron retentions
0
Competing 5' splice sites
1
Cassette exons
1
Competing 3' splice sites
1
Edges and vertices are color annotated according to the
alternative splicing events
in which they participate. Edges that correspond to non-canonical splice sites are denoted with an asterisk (*).
+ Gene information
Ensembl link
ENSG00000001461
Chromosome name
1
Start position
24097206
End position
24146843
Strand
1
Annotation version
ENSG00000001461.2
External gene id
NM_020448
Ensemble gene id
ENSG00000001461
+ Links to other alternative splicing databases
ProSplicer
ENSG00000001461
PALS
Hs.13804
SpliceNest
Hs.13804
HASDB
Hs.13804
ASAP
Hs.13804
ASD
ENSG00000001461
+ Resources
Representative assemblies (7)
All assemblies (20)
Probes
Supporting ESTs
About
ASG
Search Human Splicing Graphs 