Links

Databases:
National Center for Biotechnology Information

Phytozome : The JGI Comparative Plant Genomics Portal, a joint project of the Department of Energy's Joint Genome Institute and the Center for Integrative Genomics to facilitate comparative genomic studies amongst green plants. 

PlantGDB: Resources for comparative plant genomics. 

TAIR: The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana

OMICtools: A workflow for omic data analysis(NGS, microarray, PCR, MS, NMR) 

Bioinformatics:

Bioinformatics Training from the University of California 

The R Project for Statistical Computing 

Bioconductor: open software for bioinformatics in R

Bowtie 2 : Fast and sensitive read alignment

TopHat : A spliced read mapper for RNA-Seq

Pop's Pipes: Poplar Gene Expression Pipelines

BETA: Binding and Expression Target Analysis

AgriGo: Go analysis Toolkit adn Database for Agriculture Community

 

Others:

Abbreviation of journal name