Monday and Wednesday: 3:00-4:15P.M.
Classroom: Riddick 315
Scans of transparencies from initial/review lecture (file "bioinf.introlecture.pdf")
Lecture
Notes (pages 1-21, file "markov.pdf")
Lecture
Notes (pages 22-28, file "markov2.pdf")
Lecture
Notes (pages 29-31, file "markov3.pdf")
Lecture
Notes (pages 32-58, file "genefind.pdf")
Lecture
Notes (pages 59-65, file "gotoh.pdf")
Lecture
Notes (pages 66-71, file "hmmali.pdf")
Lecture
Notes (pages 72-80, file "dirichlet.pdf")
Lecture Notes (pages 80-95, file "multali2008.pdf")
Lecture Notes on parsimony (file "parsimony2007.pdf")
2/25/08 Lecture by Dr. Redelings (file "redelingslecture.pdf")
Lecture
Notes (pages 96-117, file "scoring.pdf")
Lecture
Notes on Metropolis-Hastings algorithm (pages 118-127, file "bayes.pdf")
Supplementary material related to lecture of Monday March 10
Lecture
Notes on Gibbs Sampling algorithm (pages 128-135, file "gibbs2008.pdf")
Lecture Notes on some assorted databases (pages 136-144, file "databases2008.pdf")
First lecture on protein structure (pages 145-149, file "protstruct.pdf")
Some
historical CASP material
(150-157 and more, file "casp2008.pdf")
Lecture on applied molecular evolution